| References |
|
|
Bernad L,
Duran-Vila N and
Elena SF
(2009)
Effect of citrus hosts on the generation, maintenance and evolutionary fate of genetic variability of citrus exocortis viroid.
Journal of General Virology
90:
20402049.
|
|
|
Bonfiglioli RG,
Webb DR and
Symons RH
(1996)
Tissue and intra-cellular distribution of coconut cadang-cadang viroid and citrus exocortis viroid determined by in situ hybridization and confocal laser scanning and transmission electron microscopy.
Plant Journal
9:
457465.
|
|
|
Branch AD and
Robertson HD
(1984)
A replication cycle for viroids and other small infectious RNAs.
Science
223:
450454.
|
|
|
Bussière F,
Ouellet J,
Côté F,
Lévesque D and
Perreault JP
(2000)
Mapping in solution shows the peach latent mosaic viroid to possess a new pseudoknot in a complex, branched secondary structure.
Journal of Virology
74:
26472654.
|
|
|
Carbonell A,
Flores R and
Gago S
(2011)
Trans-cleaving hammerhead ribozymes with tertiary stabilizing motifs: in vitro and in vivo activity against a structured viroid RNA.
Nucleic Acids Research (in press). doi:10.1093/nar/gkq1051.
|
|
|
Daròs JA and
Flores R
(1995)
Identification of a retroviroid-like element from plants.
Proceedings of the National Academy of Sciences of the USA
92:
68566860.
|
|
|
Daròs JA,
Marcos JF,
Hernández C and
Flores R
(1994)
Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.
Proceedings of the National Academy of Sciences of the USA
91:
1281312817.
|
|
|
De la Peña M,
Gago S and
Flores R
(2003)
Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity.
EMBO Journal
22:
55615570.
|
|
|
Diener TO
(1972)
Potato spindle tuber viroid VIII. Correlation of infectivity with a UV-absorbing component and thermal denaturation properties of the RNA.
Virology
50:
606609.
|
|
|
Diener TO
(1989)
Circular RNAs: relics of precellular evolution?
Proceedings of the National Academy of Sciences of the USA
86:
93709374.
|
|
|
Ding B,
Kwon MO,
Hammond R and
Owens R
(1997)
Cell-to-cell movement of potato spindle tuber viroid.
Plant Journal
12:
931936.
|
|
|
Di Serio F,
Martínez de Alba AE,
Navarro B,
Gisel A and
Flores R
(2010)
RNA-dependent RNA polymerase 6 delays accumulation and precludes meristem invasion of a nuclear-replicating viroid.
Journal of Virology
84:
24772489.
|
|
|
Gago S,
de la Peña M and
Flores R
(2005)
A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability.
RNA
11:
10731083.
|
|
|
Gago S,
Elena SF,
Flores R and
Sanjuán R
(2009)
Extremely high variability of a hammerhead viroid.
Science
323:
1308.
|
|
|
Gas ME,
Hernández C,
Flores R and
Daròs JA
(2007)
Processing of nuclear viroids in vivo: an interplay between RNA conformations.
PLoS Pathogens
3:
18131826.
|
|
|
Gómez G and
Pallás V
(2004)
A long-distance translocatable phloem protein from cucumber forms a ribonucleoprotein complex in vivo with hop stunt viroid RNA.
Journal of Virology
78:
1010410110.
|
|
|
Grill LK and
Semancik JS
(1978)
RNA sequences complementary to citrus exocortis viroid in nucleic acid preparations from infected Gynura aurantiaca.
Proceedings of the National Academy of Sciences of the USA
75:
896900.
|
|
|
Gross HJ,
Domdey H,
Lossow C et al.
(1978)
Nucleotide sequence and secondary structure of potato spindle tuber viroid.
Nature
273:
203208.
|
|
|
Hadidi A and
Yang X
(1990)
Detection of pome fruit viroids by enzymatic cDNA amplification.
Journal of Virological Methods
30:
261270.
|
|
|
Hammond R,
Smith DR and
Diener TO
(1989)
Nucleotide-sequence and proposed secondary structure of columnea latent viroid: a natural mosaic of viroid sequences.
Nucleic Acids Research
17:
1008310094.
|
|
|
Haseloff J,
Mohamed NA and
Symons RH
(1982)
Viroid RNAs of cadang-cadang disease of coconuts.
Nature
299:
316321.
|
|
|
Hernández C and
Flores R
(1992)
Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures.
Proceedings of the National Academy of Sciences of the USA
89:
37113715.
|
|
|
Hutchins C,
Rathjen PD,
Forster AC and
Symons RH
(1986)
Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid.
Nucleic Acids Research
14:
36273640.
|
|
|
Itaya A,
Zhong X,
Bundschuh R et al.
(2007)
A structured viroid RNA is substrate for Dicer-like cleavage to produce biologically active small RNAs but is resistant to RISC-mediated degradation.
Journal of Virology
81:
29802994.
|
|
|
Kalantidis K,
Denti MA,
Tzortzakaki S et al.
(2007)
Virp1 is a host protein with a major role in potato spindle tuber viroid infection in Nicotiana plants.
Journal of Virology
81:
1287212880.
|
|
|
Keese P and
Symons RH
(1985)
Domains in viroids: evidence of intermolecular RNA rearrangements and their contribution to viroid evolution.
Proceedings of the National Academy of Sciences of the USA
82:
45824586.
|
|
|
Martínez de Alba AE,
Flores R and
Hernández C
(2002)
Two chloroplastic viroids induce the accumulation of the small RNAs associated with post-transcriptional gene silencing.
Journal of Virology
76:
1309413096.
|
|
|
Martínez de Alba AE,
Sägesser R,
Tabler M and
Tsagris M
(2003)
A bromodomain-containing protein from tomato specifically binds potato spindle tuber viroid RNA in vitro and in vivo.
Journal of Virology
77:
96859694.
|
|
|
Mühlbach HP and
Sänger HL
(1979)
Viroid replication is inhibited by -amanitin.
Nature
278:
185188.
|
|
|
Navarro B and
Flores R
(1997)
Chrysanthemum chlorotic mottle viroid: unusual structural properties of a subgroup of self-cleaving viroids with hammerhead ribozymes.
Proceedings of the National Academy of Sciences of the USA
94:
1126211267.
|
|
|
Navarro JA and
Flores R
(2000)
Characterization of the initiation sites of both polarity strands of a viroid RNA reveals a motif conserved in sequence and structure.
EMBO Journal
19:
26622670.
|
|
|
Niblett CL,
Dickson E,
Fernow KH,
Horst RK and
Zaitlin M
(1978)
Cross-protection among four viroids.
Virology
91:
198293.
|
|
|
Owens RA and
Diener TO
(1981)
Sensitive and rapid diagnosis of potato spindle tuber disease by nucleic acid hybridization.
Science
213:
670672.
|
|
|
Palukaitis P
(1987)
Potato spindle tuber viroid: investigation of the long-distance, intra-plant transport route.
Virology
158:
239241.
|
|
|
Papaefthimiou I,
Hamilton AJ,
Denti MA et al.
(2001)
Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing.
Nucleic Acids Research
29:
23952400.
|
|
|
Prody GA,
Bakos JT,
Buzayan JM,
Schneider IR and
Bruening G
(1986)
Autolytic processing of dimeric plant virus satellite RNA.
Science
231:
15771580.
|
|
|
Qi Y and
Ding B
(2003)
Differential subnuclear localization of RNA strands of opposite polarity derived from an autonomously replicating viroid.
Plant Cell
15:
25662577.
|
|
|
Qi YJ,
Pelissier T,
Itaya A et al.
(2004)
Direct role of a viroid RNA motif in mediating directional RNA trafficking across a specific cellular boundary.
Plant Cell
16:
17411752.
|
|
|
Qu F,
Heinrich C,
Loss P et al.
(1993)
Multiple pathways of reversion in viroid conservation of structural domains.
EMBO Journal
12:
21292139.
|
|
|
Rodio ME,
Delgado S,
De Stradis A et al.
(2007)
A viroid RNA with a specific structural motif inhibits chloroplast development.
Plant Cell
19:
36103616.
|
|
|
Sano T,
Candresse T,
Hammond RW,
Diener TO and
Owens RA
(1992)
Identification of multiple structural domains regulating viroid pathogenicity.
Proceedings of the National Academy of Sciences of the USA
89:
1010410108.
|
|
|
Sano T,
Nagayama A,
Ogawa T,
Ishida I and
Okada Y
(1997)
Transgenic potato expressing a double-stranded RNA-specific ribonuclease is resistant to potato spindle tuber viroid.
Nature Biotechnology
15:
12901294.
|
|
|
Schwind N,
Zwiebel M,
Itaya A et al.
(2009)
RNAi-mediated resistance to potato spindle tuber viroid in transgenic tomato expressing a viroid hairpin RNA construct.
Molecular Plant Pathology
10:
459469.
|
|
|
Semancik JS,
Szychowski JA,
Rakowski AG and
Symons RH
(1993)
Isolates of citrus exocortis viroid recovered by host and tissue selection.
Journal of General Virology
74:
24272436.
|
|
|
Semancik JS and
Szychowski JA
(1994)
Avocado sunblotch disease: a persistent viroid infection in which variants are associated with different symptoms.
Journal of General Virology
75:
15431549.
|
|
|
Wang MB,
Bian XY,
Wu LM et al.
(2004)
On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites.
Proceedings of the National Academy of Sciences of the USA
101:
32753280.
|
|
|
Wassenegger M,
Heimes S and
Sänger HL
(1994)
An infectious viroid RNA replicon evolved from an in vitro-generated non-infectious viroid deletion mutant via a complementary deletion in vivo.
EMBO Journal
13:
61726177.
|
|
|
Wassenegger M,
Spieker RL,
Thalmeir S et al.
(1996)
A single nucleotide substitution converts potato spindle tuber viroid (PSTVd) from a noninfectious to an infectious RNA for Nicotiana tabacum.
Virology
226:
191197.
|
|
|
Yang X,
Yie Y,
Zhu F et al.
(1997)
Ribozyme-mediated high resistance against potato spindle tuber viroid in transgenic potatoes.
Proceedings of the National Academy of Sciences of the USA
94:
48614865.
|
|
|
Zhong X,
Archual AJ,
Amin AA and
Ding BA
(2008)
A genomic map of viroid RNA motifs critical for replication and systemic trafficking.
Plant Cell
20:
3547.
|
|
|
Zhu Y,
Green L,
Woo YM,
Owens R and
Ding B
(2001)
Cellular basis of potato spindle tuber viroid systemic movement.
Virology
279:
6977.
|
| Further Reading |
|
|
book
Diener TO (ed.)
(1987)
The Viroids (The Viruses),
p. 344.
New York: Plenum Press.
|
|
|
Diener TO
(1996)
Origin and evolution of viroids and viroid-like satellite RNAs.
Virus Genes
11:
119131.
|
|
|
Diener TO
(2003)
Discovering viroids a personal perspective.
Nature Reviews Microbiology
1:
7580.
|
|
|
Ding B
(2009)
The biology of viroid-host interactions.
Annual Review of Phytopathology
47:
105131.
|
|
|
Flores R,
Daros JA and
Hernández C
(2000)
The Avsunviroidae family: viroids with hammerhead ribozymes.
Advances in Virus Research
55:
271323.
|
|
|
Flores R,
Hernández C,
Martínez de Alba AE,
Daros JA and
Di Serio F
(2005)
Viroids and viroidhost interactions.
Annual Review of Phytopathology
43:
117139.
|
|
|
book
Flores R,
Randles JW,
Owens RA,
Bar-Joseph M and
Diener TO
(2005)
"Viroidae".
In: Fauquet CM,
Mayo MA and
Maniloff J et al. (eds)
Virus Taxonomy, Classification and Nomenclature. VIIII Report of the International Committee on Taxonomy of Viruses,
pp. 11451159.
London, UK: Elsevier/Academic Press.
|
|
|
book
Hadidi A,
Flores R,
Randles JW and
Semancik JS (eds)
(2003)
Viroids,
p. 370.
Collingwood, Australia: CSIRO Publishing.
|
|
|
Symons RH
(1997)
Plant pathogenic RNAs and RNA catalysis.
Nucleic Acids Research
20:
26832689.
|
|
|
Tsagris EM,
Martínez de Alba AE,
Gozmanova M and
Kalantidis K
(2008)
Viroids.
Cellular Microbiology
10:
21682179.
|