Binding Constants: Measurement and Biological Range

Several methods exist for the measurement of binding constants for macromolecular interactions between dissimilar reactants. These allow biological interactions with binding constants in the range 102 to 109 mol L–1 to be characterized quantitatively.

Keywords: equilibrium interactions; reaction thermodynamics; ligand–acceptor (receptor) interactions

Figure 1. Presentation of data for the interaction of a univalent ligand with acceptor. (a) Simulated rectangular hyperbolic dependence of the binding function upon free ligand concentration (eqn (2)) for an acceptor with four sites (n = 4) governed by an intrinsic binding constant (KAS) of 105 mol L–1. (b) Scatchard linear transformation (eqn (4a)) of the same dependence.
Figure 2. Allowance for ligand multivalence in the analysis of binding data. (a) Multivalent equivalent of the rectangular hyperbolic dependence of binding function upon free ligand concentration (eqn (6a)), simulated for a system with f = 2, n = 1, KAS = 105 mol L–1 and [A]tot = 20 mol L–1. (b) General counterpart of the Scatchard plot (eqn (6b)) of the same dependence. (c) Conventional Scatchard plot of the same data.
Figure 3. Evaluation of binding constants by biosensor technology. Simulated time dependence of biosensor response resulting from injection (at 5 L min–1) of 30 L of A (100 nmol L–1) followed by buffer, B, (eqns (7a) and (8)) for a system with Rmax = 3000 units, ka = 105 mol L–1 s–1 and kd = 10–2 s–1. 1000 B/A core units = 0.1 degree. Inset: determination of the association and dissociation rate constants from the dependence of the pseudo-first-order rate constant (kobs) upon the injected concentration of A (eqn (8)).
close
 References
    Freire E, Mayorga OL and Straume M (1990) Isothermal titration calorimetry. Analytical Chemistry 62: 950A–959A.
    Harris SJ, Jackson CM and Winzor DJ (1995) The rectangular hyperbolic binding equation for multivalent ligands. Archives of Biochemistry and Biophysics 316: 20–23.
    Hogg PJ and Winzor DJ (1985) Effects of ligand multivalency in binding studies: a general counterpart of the Scatchard analysis. Biochimica et Biophysica Acta 843: 159–163.
    Hummel JP and Dreyer WJ (1962) Measurement of protein-binding phenomena by gel filtration. Biochimica et Biophysica Acta 63: 530–532.
    Karlsson R, Michaelson A and Mattson L (1991) Kinetic analysis of monoclonal antibody–antigen interactions with a new biosensor based analytical system. Journal of Immunological Methods 145: 229–240.
    O'Shannessy DJ, Brigham-Burk M, Soneson KK, Hensley P and Brooks I (1993) Determination of rate and equilibrium constants for macromolecular interactions using surface plasmon resonance: use of nonlinear least-squares methods. Analytical Biochemistry 212: 457–468.
    Scatchard G (1949) The attraction of proteins for small molecules and ions. Annals of the New York Academy of Sciences 51: 660–672.
    book Swaisgood HE and Chaiken IM (1987) "Analytical affinity chromatography and characterization of biomolecular interactions". In: Chaiken IM (ed.) Analytical Affinity Chromatography, pp. 65–115. Boca Raton, FL: CRC Press.
    Winzor DJ (1995) Measurement of binding constants by capillary electrophoresis. Journal of Chromatography A 696: 160–163.
    book Winzor DJ and Jackson CM (1993) "Determination of binding constants by quantitative affinity chromatography: current and future applications". In: Kline T (ed.) Handbook of Affinity Chromatography, pp. 253–298. New York: Marcel Dekker.
 Further Reading
    book Cserháti T and Valkó K (1994) Chromatographic Determination of Molecular Interactions. Boca Raton, FL: CRC Press.
    Hall DR and Winzor DJ (1998) Potential of biosensor technology for the characterization of interactions by quantitative affinity chromatography. Journal of Chromatography B 715: 163–181.
    Jameson DM and Sawyer WH (1995) Fluorescence anisotropy applied to macromolecular interactions. Methods in Enzymology 246: 283–300.
    book Lundahl P, Greiger E and Lundqvist A (eds) (1998) Quantitative Analysis of Biospecific Interactions. Chur, Switzerland: Harwood.
    book Winzor DJ (1997) "Quantitative affinity chromatography". In: Matetschuk P (ed.) Affinity Separations: A Practical Approach, pp. 39–60. Oxford: IRL Press.
    book Winzor DJ and Sawyer WH (1995) Quantitative Characterization of Ligand Binding. New York: Wiley–Liss.
Contact Editor close
Submit a note to the editor about this article by filling in the form below.

* Required Field

How to Cite close
Winzor, Donald J(Apr 2001) Binding Constants: Measurement and Biological Range. In: eLS. John Wiley & Sons Ltd, Chichester. http://www.els.net [doi: 10.1038/npg.els.0000615]