Selenocysteine

The trace element selenium is present in the form of selenocysteine in selected proteins of organisms from all three lines of descent. Selenocysteine incorporation is DNA-encoded, determined by the UGA codon, and occurs via a unique mechanism representing an expansion of the genetic code.

Keywords: selenoproteins; SelB; selenocysteyl-tRNA; SECIS; recoding

Figure 1. Cloverleaf structures of selenocysteine tRNAs from E. coli, M. jannaschii and humans. Novel tertiary interactions are indicated by bold arrows. Positions conserved in all elongator tRNAs are circled; positions deviating from the consensus are boxed (Sturchler et al., 1993; Baron and Böck, 1995).
Figure 2. Interactions of SelB with ligands. Domains I, II and III are homologous to those from EF-Tu and interact with guanine nucleotides and selenocysteyl-tRNA; domain IVb binds the SECIS element. Binding of the charged tRNA confers on SelB a conformation with a higher affinity for the SECIS structure. This form of SelB is able to interact with the ribosome, induce GTP hydrolysis and release the charged tRNA. The isolated domain IVb has the same affinity for the SelB protein as the whole-length protein carrying the tRNA. Numbers give the equilibrium constants as determined by stopped-flow analysis (Thanbichler; Böck, 2001).
Figure 3. Model of the function of the SECIS element in selenocysteine insertion by bacteria (Baron and Böck, 1995) and eukarya (Tujebajeva et al., 2000).
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 References
    book Baron C and Böck A (1995) "The selenocysteine inserting tRNA species: structure and function". In: Söll D and RajBhandhary UL (eds) tRNA: Structure, Biosynthesis and Function, pp. 529–544. Washington, DC: American Society of Microbiology.
    book Böck A (2001) "Selenium metabolism in bacteria". In: Hatfield DL (ed.) Selenium. Its Molecular Biology and Role in Human Health, pp. 7–21. Boston: Kluwer Academic.
    book Carlson BA, Martin-Romero FJ, Kumaraswamy E et al. (2001) "Mammalian selenocysteine tRNA". In: Hatfield DL (ed.) Selenium. Its Molecular Biology and Role in Human Health, pp. 23–32. Boston: Kluwer Academic.
    Copeland PR, Fletcher JE, Carlson BA, Hatfield DL and Driscoll DM (2000) A novel RNA binding protein, SBP2, is required for the translation of mammalian selenoprotein mRNAs. EMBO Journal 19: 306–314.
    Fagegaltier D, Hubert N, Yamada K et al. (2000) Characterisation of mSelB, a novel mammalian elongation factor for selenoprotein translation. EMBO Journal 19: 4796–4805.
    Klug SJ, Hüttenhofer A, Kromayer M and Famulok M (1997) In vitro and in vivo characterization of novel mRNA motifs that bind special elongation factor SelB. Proceedings of the National Academy of Sciences of the USA 94: 6676–6681.
    Köhrle J, Brigelius-Flohe R, Böck A et al. (2000) Selenium in biology: facts and medical perspectives. Biological Chemistry 381: 849–864.
    Krol A (2002) Evolutionarily different RNA motifs and RNA–protein complexes to achieve selenoprotein synthesis. Biochimie 84: 765–774.
    book Lacourciere, GM (2001) "Selenophosphate – selenium donor for protein and RNA". In: Selenium. Its Molecular Biology and Role in Human Health, pp. 33–44. Boston: Kluwer Academic.
    Rother M, Resch A, Wilting R and Böck A (2001) Selenoprotein synthesis in Archaea. BioFactors 14: 75–83.
    Selmers M and Xu X-D (2002) Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB. EMBO Journal 21: 4145–4153.
    Stadtman TC (1996) Selenocysteine. Annual Review of Biochemistry 65: 83–100.
    Sturchler CE, Westhof E, Carbon P and Krol A (1993) Unique secondary and tertiary structural features of the eucaryotic selenocysteine tRNA (Sec). Nucleic Acids Research 21: 1073–1079.
    Sunde RA (1990) Molecular biology of selenoproteins. Annual Review of Nutrition 10: 451–474.
    Thanbichler M and Böck A (2001) Functional analysis of prokaryotic SelB proteins. BioFactors 14: 53–59.
    Tujebajeva RM, Copeland PR, Xu XM et al. (2000) Decoding apparatus for eukaryotic selenocysteine insertion. EMBO Reports 1: 158–163.
    Ursini F, Heim S, Kiess M et al. (1999) Dual function of the selenoprotein PHGPx during sperm maturation. Science 285: 1393–1396.
 Further Reading
    book Atkins JF, Böck A, Matsufuji S and Gesteland RF (1999) "Dynamics of the genetic code". In: Gesteland RF, Cech TR, Atkins JF (eds). The RNA World, 2nd edn, pp. 637–673. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
    book Hatfield DL (ed.) (2001) Selenium. Its Molecular Biology and Role in Human Health. Boston: Kluwer Academic.
    book Hüttenhofer A and Böck A (1998) "RNA structures involved in selenoprotein synthesis". In: Simons RW and Grunberg-Manago M (eds) RNA Structure and Function, pp. 603–638. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
    Low SC and Berry MJ (1996) Knowing when not to stop: selenocysteine incorporation in eukaryotes. Trends in Biochemical Sciences 21: 203–208.
    Stadtman TC (1996) Selenocysteine. Annual Review of Biochemistry 65: 83–100.
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How to Cite close
Böck, August(May 2005) Selenocysteine. In: eLS. John Wiley & Sons Ltd, Chichester. http://www.els.net [doi: 10.1038/npg.els.0003891]