RNA Interactions in mRNA Splicing

Complex ribonucleoprotein machines called spliceosomes remove introns from nuclear messenger ribonucleic acid (mRNA) precursors by mRNA splicing. A dynamic network of RNA interactions in the spliceosome plays crucial roles in splice site recognition and provides a structural framework for the catalytic steps of mRNA splicing.

Keywords: splicing; mRNA; spliceosome; snRNA

Figure 1. Cartoon showing the dynamic network of RNA interactions at three successive stages of formation and activation of a conventional (U2-type) cis-spliceosome (precatalytic, first-step catalysis and second-step catalysis, respectively). ‘*’ Indicates a non-Watson–Crick interaction between the G residues at the 5¢ and 3¢ ends of the intron. See the text for detailed explanation. Modified with permission from Nilsen (1998). Copyright © 1998 Cold Spring Harbor Laboratory Press.
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 Further Reading
    Brow DA (2002) Allosteric cascade of spliceosome activation. Annual Review of Genetics 36: 333–360.
    Butcher SE and Brow DA (2005) Towards understanding the catalytic core structure of the spliceosome. Biochemical Society Transactions 33: 447–449.
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    book Nilsen TW (1998) "RNA–RNA interactions in nuclear pre-mRNA splicing". In: Simons R and Grunberg-Manago M (eds) RNA Structure and Function. New York: Cold Spring Harbor Laboratory Press.
    Patel AA and Steitz JA (2003) Splicing double: insights from the second spliceosome. Nature Reviews Molecular Cell Biology 4: 960–970.
    book Will CL and Luhrmann R (2006) "Spliceosome structure and function". In: Cech T and Atkins J (eds) The RNA World. New York: Cold Spring Harbor Laboratory Press.
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Newman, Andrew J(Mar 2008) RNA Interactions in mRNA Splicing. In: eLS. John Wiley & Sons Ltd, Chichester. http://www.els.net [doi: 10.1002/9780470015902.a0000881.pub2]