The eukaryotic genome appears to have arisen by duplication of ancestral genomes and ancestral genes.
Keywords: HOX genes; gene clusters; pattern formation; Pax genes; junk DNA
Susumo Ohno†, Beckman Research Institute of the City of Hope, Duarte, California, USA
Gerald P Holmquist, City of Hope Medical Center, Duarte, California, USA
Published online: October 2001
DOI: 10.1038/npg.els.0001062
The eukaryotic genome appears to have arisen by duplication of ancestral genomes and ancestral genes.
Keywords: HOX genes; gene clusters; pattern formation; Pax genes; junk DNA
| References | |
| Averof M and Akam M (1995) Hox genes and the diversification of insect and crustacean body plans. Nature (London) 376: 420423. | |
| Brenner S, Elgar G, Sanford R et al. (1993) Characteristic of the pufferfish (Fugu) genome as a compact vertebrate genome. Nature (London) 366: 265268. | |
| Cavalier-Smith T (1987) The simultaneous symbiotic origin of mitochondria, chloroplasts and microbodies. New York Academy of Sciences 503: 5571. | |
| Condie BG and Capecchi MR (1994) Mice with targeted disruptions in paralogous genes Hoxa-3 and Hoxd-3 revealed synergic interactions. Nature (London) 370: 304307. | |
| Conway Morris S (1989) Burges shale faunas and the Cambrian explosion. Science 246: 339346. | |
| Davis AP, Witte DP, Hsieh-Li HM, Patter SS and Capecchi MR (1995) Absence of radius and ulna in mice lacking Hoxa-11 and Hoxd-11. Nature (London) 375: 791795. | |
| Duboule D (1992) The vertebrate limb: a model system to study the Hox/HOM gene network during development and evolution. BioEssays 14: 375384. | |
| Duboule D and Morata G (1994) Colinearity and functional hierarchies among genes of the homeotic complexes. Trends in Genetics 10: 358364. | |
| Escriba H, Safi R, Hanni C et al. (1997) Ligand binding was acquired during evolution of nuclear receptors. Proceedings of the National Academy of Sciences of the USA 94: 68036808. | |
| Halder G, Gallaerts P and Gehring WJ (1996) Induction of ectopic eyes by targeted expression of the eyeless gene in Drosophila. Science 267: 14881492. | |
| Holland PWH, Garcia-Fernandez J, Williams NA and Sidow A (1994) Gene duplication and the origin of vertebrate development. Development Supplement 125133. | |
| Lewis EB (1978) A gene complex controlling segmentation in Drosophila. Nature (London) 276: 567570. | |
| Lundin LG (1993) Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the mouse. Genomics 16: 119. | |
| Matsuo T, Osumi-Yamashita N, Noji S et al. (1993) A mutation in the Pax-6 gene in rat small eye is associated with impared migration of midbrain crest cells. Nature Genetics 3: 299304. | |
| McGinnis N, Kuriora MA and McGinnis W (1990) Human HOX4.2 and Drosophila Deformed encode similar regulatory specificities in Drosophila embryos and larvae. Cell 63: 969973. | |
| Noegel A, Gerisch G, Stadler J and Westphal M (1986) Complete sequence and transcription regulation of a cell adhesion protein from aggregating dictiostelium cells. EMBO Journal 5: 14731476. | |
| book Ohno S (1970) Evolution by Gene Duplication. Heidelberg, New York: Springer-Verlag. | |
| book Ohno S (1972) "So much junk DNA in our genome". In: Smith HH (ed.) Evolution of Genetic Systems (Brookhaven Symposium No. 26). New York: Gordon & Breach. | |
| Schopf JW (1993) Microfossils of the early archean apex chart: new evidence of the antiquity of life. Science 260: 640646. | |
| Simmen MW, Leitgeb S, Clark VH, Jones SJM and Bird A (1998) Gene number in an invertebrate chordate, Ciona intestinalis. Proceedings of the National Academy of Sciences of the USA 95: 44374440. | |
| Spring J (1997) Vertebrate evolution by interspecific hybridization: are we polyploid? FEBS Letters 400: 28. | |
| van Verseveld HW and Bosma G (1987) The respiratory chain and energy conservation in the mitochondrion-like bacterium Paracoccus denitrificans. Microbiological Science 4: 329333. | |
| Wolfe KH and Shields DC (1997) Molecular evidence for an ancient duplication of the entire yeast genome. Nature (London) 387: 708713. | |