Nuclear Protein Import: Methods

Protein synthesis takes place in the cytoplasm, so that proteins needed in the nuclear compartment, e.g. for control of gene transcription, have to be transported there from their site of synthesis. Analysis of the regulation of nuclear import requires dynamic experimental systems ideally able to provide quantitative kinetic information.

Keywords: nuclear protein import kinetics; nuclear envelope; transcription factors; in vitro reconstituted system; nuclear localization sequence

Figure 1. Steady state analysis of nuclear protein import using transfection. Using chemical (e.g. liposome-mediated) or physical (e.g. electroporation) methods, cells can be induced to take up plasmid DNA that encodes the protein to be analysed. After 1–2 days to allow protein expression and nuclear translocation, the cells are fixed and subcellular localization of the protein of interest determined by immunofluorescence and fluorescence microscopy. Results (bottom) are shown for cells transfected in parallel expressing either an NLS-containing protein (left) or an NLS mutant variant (right).
Figure 2. Reconstitution of signal-dependent nuclear protein import in vitro. Since the nuclear envelope has a lipid composition distinct from that of the plasma membrane and in particular is low in cholesterol, the detergent digitonin can be used to permeabilize the plasma membrane and leave the nuclear envelope intact (Adam et al., 1990). Nuclear import of NLS-containing proteins can then be reconstituted through adding cytosolic factors and an ATP-regenerating system. Results (bottom) are shown for 2 and 40 minute time-points of accumulation of an NLS-containing protein.
Figure 3. Kinetic analysis of the regulation of NLS-dependent nuclear protein import. The TF SWI5 is normally only present in the yeast nucleus in G1 of the cell cycle as the result of cell cycle-dependent phosphorylation by CDC28 kinase. Plots are shown from an experiment in which fluorescently labelled wild-type SWI5 fusion protein able to be phosphorylated by CDC28, and a phosphorylation site mutant variant were microinjected into HTC rat hepatoma cells and transport kinetics were measured using confocal laser scanning microscopy and image analysis. Only in the case of the mutant, where CDC28 phosphorylation is absent, is nuclear accumulation observed, to levels about 8-fold those in the cytoplasm. See Jans DA et al. (1995). Insets show confocal micrographs 40 minutes after microinjection.
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 References
    Adam EJH and Adam SA (1994) Identification of cytosolic factors required for nuclear location sequence-mediated binding to the nuclear envelope. Journal of Cell Biology 125: 547–555.
    Adam SA, Sterne-Marr RE and Gerace L (1990) Nuclear import in permeabilized mammalian cells requires soluble cytoplasmic factors. Journal of Cell Biology 111: 807–816.
    Jans DA, Ackermann M, Bischoff JR, Beach DH and Peters R (1991) p34cdc2-mediated phosphorylation at T124 inhibits nuclear import of SV40 T-antigen proteins. Journal of Cell Biology 115: 1203–1212.
    Jans DA and Huebner S (1996) Regulation of protein transport to the nucleus – the central role of phosphorylation. Physiological Reviews 76: 651–685.
    Jans DA, Moll T, Nasmyth K and Jans P (1995) Cyclin-dependent kinase-site regulated signal dependent nuclear localization of the SWI5 yeast transcription factor in mammalian cells. Journal of Cell Biology 270: 17064–17067.
    Moore MS and Blobel G (1992) The two steps of nuclear import, targeting to the nuclear envelope and translocation through the nuclear pore, require different cytosolic factors. Cell 69: 939–950.
    Moore MS and Blobel G (1993) The GTP-binding protein Ran/TC4 is required for protein import into the nucleus. Nature 365: 661–663.
 Further Reading
    Nigg EA (1997) Nucleocytoplasmic transport: signals, mechanisms and regulation. Nature 386: 779–787.
    book Jans DA (1996) "Protein transport to the nucleus and its regulation". In: Hurtley SM (ed.) OUP Frontiers in Molecular Biology: Protein Targeting, pp 25–62. Oxford: Science International, ICRL Press.
    Jans DA, Xiao C-Y and Lam MHC (2000) Nuclear targeting signal recognition: a key control point in nuclear transport. BioEssays 22: [in press].
    book Matsumoto B (ed.) (1993) "Cell Biological Applications of Confocal Microscopy". In: Methods in Cell Biology, vol. 38. San Diego: Academic Press.
    book Taylor DL and Wang Y-L (eds) (1989) "Fluorescence Microscopy of Living Cells in Culture, Part A". In: Methods in Cell Biology, vol. 29. San Diego: Academic Press.
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Jans, David A(Apr 2001) Nuclear Protein Import: Methods. In: eLS. John Wiley & Sons Ltd, Chichester. http://www.els.net [doi: 10.1038/npg.els.0002616]