Peptidylproline cis–trans‐Isomerases

Peptidylproline cistrans-isomerases are ubiquitous enzymes that bind to Xaa-Pro peptide bonds in proteins and catalyse their isomerization. In addition to their role as folding helpers they are involved in multiple functions including cellular regulation.

Keywords: cyclophilin; FKBP; parvulin; protein folding

Figure 1. A prolyl peptide bond in the cis and trans isomeric forms. In the trans form, the two flanking C atoms are on opposite sides of the C–N bond; this is equivalent to a dihedral angle () of 180°. In the cis form, the two flanking C atoms are on the same side of the C–N bond; this is equivalent to a dihedral angle () of 0°.
Figure 2. Chemical structure of cyclosporin A (CSA). Ala, alanine; MeLeu, N-methyl leucine; Sar, sarcosine; Abu, l--aminoisobutyric acid; MeBmt1, (4R)-4[(E)-2-butenyl]-4-N-dimethyl-l-threonine.
Figure 3. Chemical structures of (a) FK506 and (b) rapamycin.
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 References
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    Ferreira PA, Nakayama TA, Pak WL and Travis GH (1996) Cyclophilin-related protein RanBP2 acts as chaperone for red/green opsin. Nature 383: 637–640.
    book Fischer G (1999) "Impact of natural products on cell biology: low-molecular mass effectors of folding helper enzymes". In: Grabley S and Thiericke R (eds) Drug Discovery from Nature. Berlin: Springer.
    Lee JP, Palfrey HC, Bindokas VP et al. (1999) The role of immunophilins in mutant superoxide dismutase-1-linked familial amyotrophic lateral sclerosis. Proceedings of the National Academy of Sciences of the USA 96: 3251–3256.
    Leverson JD and Ness SA (1998) Point mutations in v-Myb disrupt a cyclophilin-catalyzed negative regulatory mechanism. Molecules and Cells 1: 203–211.
    Lopez-Ilasaca M, Schiene C, Küllertz G et al. (1998) Effects of Fk506-Binding Protein 12 and Fk506 on autophosphorylation of epidermal growth factor receptor. Journal of Biological Chemistry 273: 9430–9434.
    Marks AR (1996) Cellular functions of immunophilins. Physiological Reviews 76: 631–649.
    Owens-Grillo JK, Hoffmann K, Hutchison KA et al. (1995) The cyclosporin A-binding immunophilin Cyp-40 and the FK506-binding immunophilin hsp56 bind to a common site on hsp90 and exist in independent cytosolic heterocomplexes with the untransformed glucocorticoid receptor. Journal of Biological Chemistry 270: 20479–20484.
    Stamnes MA, Shieh BH, Chuman L, Harris GL and Zuker CS (1991) The cyclophilin homolog Ninaa is a tissue-specific integral membrane protein required for the proper synthesis of a subset of Drosophila rhodopsins. Cell 65: 219–227.
    Yaffe MB, Schutkowski M, Shen MH et al. (1997) Sequence-specific and phosphorylation-dependent proline isomerization – a potential mitotic regulatory mechanism. Science 278: 1957–1960.
    Zydowsky LD, Etzkorn FA, Chang HY (1992) Active site mutants of human cyclophilin-A separate peptidylprolyl isomerase activity from cyclosporin-A binding and calcineurin inhibition. Protein Science 1: 1092–1099.
 Further Reading
    book Fischer G (1994) Peptidyl-prolyl cis/trans isomerases and their effectors. Angewandte Chemie, International Edition in English 33: 1415–1436.
    book Fischer G and Schmid FX (1998) "Peptidyl-prolyl cis/trans isomerases". Bukau B (ed.) Molecular Biology of Chaperones and Folding Catalysts, pp. 455–483. New York: Harwood Academic Publishers.
    Galat A and Metcalfe SM (1995) Peptidylproline cis/trans isomerases. Progress in Biophysics and Molecular Biology 63: 67–118.
    Hunter T (1998) Prolyl isomerase and nuclear function. Cell 92: 141–143.
    book Schmid FX (1998) "Catalysis of protein folding by prolyl isomerases". In: Fink AL and Goto Y (eds) Molecular Chaperones in the Life Cycle of Proteins, pp. 361–389. New York: Marcel Dekker.
    Schreiber SL (1991) Chemistry and biology of the immunophilins and their immunosuppressive ligands. Science 251: 283–287.
    Stein RL (1993) Mechanism of enzymatic and nonenzymatic prolyl cis-trans isomerization. Advances in Protein Chemistry 44: 1–24.
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Fischer, Gunter, and Schmid, Franz‐Xaver(Apr 2001) Peptidylproline cis–trans‐Isomerases. In: eLS. John Wiley & Sons Ltd, Chichester. http://www.els.net [doi: 10.1038/npg.els.0003020]