Crystallization of Proteins: Two‐dimensional

A number of different methods can be used to produce two-dimensional crystals of proteins – planar ordered arrays one molecule in thickness. Electron crystallography of these proteins allows their structure to be determined.

Keywords: electron crystallography; membrane proteins; protein crystallization; protein structure

Figure 1. 2D protein crystals. (a) Sheet-like form: negatively stained crystal of human AQP1 water channel in the form of a lipid bilayer sheet covering the entire field and upon which a relatively large non-crystalline vesicle rests near the top of the figure; the 2D lattice in the image shows repeat units or motifs organized in the form of a ‘burlap’ cloth-like pattern. Scale bar 100 nm. (b) Tubular form: negatively stained tubular crystals of nicotinic acetylcholine receptor formed from the incubation of protein-enriched postsynaptic membranes from Torpedo marmorata electric organs. The repeat units are organized in a helical pattern; individual molecules in the figure appear as bright ‘doughnut-shaped’ objects. Scale bar 50 nm. Part (a) reprinted with permission from the American Chemical Society (Mitra et al., 1994). Part (b) reprinted with permission from Academic Press (Unwin, 1998).
Figure 2. 2D crystallization of membrane proteins by reconstitution. (a) Dialysis method: a dialysis tube, clamped closed at both ends, containing a mixture of detergent solubilized protein and lipid, is placed in an exchange reservoir for the removal of the detergent. The average pore size of the dialysis tube is chosen to allow for the free movement of detergent molecules across the dialysis tube membrane, while retaining protein and lipid molecules. The removal of detergent molecules allows the protein and lipid molecules to form 2D crystals. (b) Bio-Beads method: Bio-Beads (shown here as light-coloured spheres at the bottom of the plastic vial) are added to a mixture of detergent-solubilized protein and lipid to adsorb detergent molecules. This process removes detergent molecules from the mixture, allowing for the formation of 2D crystals.
Figure 3. Crystallization at an air–water interface. (a) A lipid monolayer is first established at the air–water interface. Protein molecules, subsequently added to the bulk solution, concentrate at the preformed lipid monolayer due to electrostatic interactions. 2D crystals form upon incubation. (b) In this case, ligand molecules are linked to lipid head groups; protein molecules are concentrated at the lipid monolayer by protein–ligand binding interactions.
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 References
    Mitra AK, Yeager M, van Hoek AN, Weiner MC and Verkman AS (1994) Projection structure of the CHIP28 water channel in lipid bilayer membranes at 12-A resolution. Biochemistry 33: 12735–12740.
    Unwin PN (1998) The nicotinic acetylcholine receptor of the Torpedo electric ray. Journal of Structural Biology 121: 181–190.
 Further Reading
    Amos LA, Henderson R and Unwin PN (1982) Three-dimensional structure determination by electron microscopy of two-dimensional crystals. Progress in Biophysics and Molecular Biology 39: 183–231.
    Darst SA, Ahlers M, Meller PH et al. (1991) Two-dimensional crystals of streptavidin on biotinylated lipid layers and their interactions with biotinylated macromolecules. Biophysical Journal 59: 387–396.
    Henderson R, Baldwin JM, Ceska TA et al. (1990) Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. Journal of Molecular Biology 213: 899–929.
    Jap BK, Zulauf M, Scheybani T et al. (1992) 2D crystallization: from art to science Ultramicroscopy 46: 45–84.
    Kühlbrandt W (1992) Two-dimensional crystallization of membrane proteins. Quarterly Reviews of Biophysics 25: 1–49.
    Miyazawa A, Fujiyoshi Y, Stowell M and Unwin N (1999) Nicotinic acetylcholine receptor at 4.6 Å resolution: transverse tunnels in the channel wall. Journal of Molecular Biology 288: 765–786.
    Rigaud JL, Mosser G, Lacapere JJ et al. (1997) Bio-Beads: an efficient strategy for two-dimensional crystallization of membrane proteins. Journal of Structural Biology 118: 226–235.
    Wilson-Kubalek EM, Brown RE, Celia H and Milligan RA (1998) Lipid nanotubes as substrates for helical crystallization of macromolecules. Proceedings of the National Academy of Sciences of the USA 95: 8040–8045.
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How to Cite close
Jap, Bing K, and Walian, Peter J(Mar 2002) Crystallization of Proteins: Two‐dimensional. In: eLS. John Wiley & Sons Ltd, Chichester. http://www.els.net [doi: 10.1038/npg.els.0003041]