| References |
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Collins A,
Frezal J,
Teague J and
Morton NE
(1996)
A metric map of humans: 23,500 loci in 850 bands.
Proceedings of the National Academy of Sciences of the United States of America
93: 14771–14775.
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Collins A,
Lonjou C and
Morton NE
(1999)
Genetic epidemiology of single nucleotide polymorphisms.
Proceedings of the National Academy of Sciences of the United States of America
96: 15173–15177.
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Daly MJ,
Rioux JD,
Schaffner SF,
Hudson TJ and
Lander ES
(2001)
High resolution haplotype structure in the human genome.
Nature Genetics
29: 229–232.
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Dausset J,
Cann J,
Cohen D, et al.
(1990)
Program description – Centre D'Etude Polymorphisme Humain (CEPH) – collaborative genetic mapping of the human genome.
Genomics
6: 575–577.
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Dunham I,
Shimizu N,
Roe BA, et al.
(1999)
The DNA sequence of human chromosome 22.
Nature
402(6761): 489–495.
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Hattori M,
Fujiyama A,
Taylor TD, et al.
(2000)
The DNA sequence of human chromosome 21.
Nature
405: 311–319.
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Jeffreys AJ,
Kauppi L and
Neumann R
(2001)
Intensely punctuate meiotic recombination in the class II region of the major histocompatibility complex.
Nature Genetics
29: 217–222.
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Kosambi DD
(1944)
The estimation of map distances from recombination values.
Annals of Eugenics
12: 172–175.
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Lonjou C,
Collins A,
Ajioka RS, et al.
(1998)
Allelic association under map error and recombinational heterogeneity: a tale of two sites.
Proceedings of the National Academy of Sciences of the United States of America
95: 11366–11370.
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Majewski J and
Ott J
(2000)
GT repeats are associated with recombination on human chromosome 22.
Genome Research
10: 1108–1114.
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Maniatis N,
Collins A,
Xu C-F, et al.
(2002)
The first linkage disequilibrium (LD) maps: delineation of hot and cold blocks by diplotype analysis.
Proceedings of the National Academy of Sciences of the United States of America
99: 2228–2233.
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Morton NE,
Collins A,
Lawrence S and
Shields DC
(1992)
Algorithms for a location database.
Annals of Human Genetics
56: 223–232.
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Rao DC,
Morton NE,
Lindsten J,
Hultén M and
Yee S
(1977)
A mapping function for man.
Human Heredity
27: 99–104.
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Teague JW,
Collins A and
Morton NE
(1996)
Studies on locus content mapping.
Proceedings of the National Academy of Sciences of the United States of America
93: 11814–11818.
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Thomas NS,
Collins AR,
Hassold TJ and
Jacobs PA
(2000)
A reinvestigation of nondisjunction resulting in 47, XXY males of paternal origin.
European Journal of Human Genetics
8: 805–809.
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| Further Reading |
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Cardon LR and
Bell JI
(2001)
Association study designs for complex diseases.
Nature Reviews Genetics
2: 91–99.
Good review of linkage disequilibrium mapping of disease genes.
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Collins A
(2000)
Mapping in the sequencing era.
Human Heredity
50: 76–84.
This article makes the case for maps and map integration to continue postsequencing. Linkage disequilibrium maps were not fully anticipated at this stage.
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Ennis S,
Maniatis N and
Collins A
(2001)
Allelic association and disease mapping.
Briefings in Bioinformatics
2: 375–387.
Reviews different measures of LD, diplotype analysis and the background to LD maps.
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Morton NE
(1991)
Parameters of the human genome.
Proceedings of the National Academy of Sciences of the United States of America
88: 7474–7476.
Perhaps the first paper to give credible genome map lengths on different map scales. Still in use today since large tracts of the genome remain unsequenced for various reasons.
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Morton NE and
Collins A
(1997)
The future of gene mapping.
Genetic Analysis: Biomolecular Engineering
14: 25–27.
This article makes the case for maps and map integration to continue postsequencing. Linkage disequilibrium maps were not fully anticipated at this stage.
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Olivier M,
Aggarwal A,
Allen J, et al.
(2001)
A high resolution radiation hybrid map of the human genome draft sequence.
Science
291: 1298.
Radiation hybrid maps remain useful for connectivity and orientation of sequenced contigs.
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Patil N,
Berno AJ,
Hinds DA, et al.
(2001)
Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21.
Science
294: 1719–1723.
The haplotype structure for a human chromosome established using 24047 SNPs. The first whole-chromosome LD maps may not be far away.
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Taillon-Miller P,
Bauer-Sardina I,
Saccone NL, et al.
(2000)
Juxtaposed regions of extensive and minimal linkage disequilibrium in human Xq25 and Xq28.
Nature Genetics
25: 324–328.
One of the first papers to demonstrate substantial variation in patterns of LD, a forerunner of LD ‘blocks’.
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Yu A,
Zhao C,
Fan Y, et al.
(2001)
Comparison of human genetic and sequence-based maps.
Nature
409: 951–953.
Preliminary assessment of genetic and sequence map relationships based largely on draft sequence.
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| Web Links |
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ePath
CEPH (version 9) Genotype Database. Genotypes for genetic markers typed in the CEPH reference panel
http://www.cephb.fr/cephdb
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ePath
Center for Medical Genetics. Marshfield maps
http://research.marshfieldclinic.org/genetics/
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ePath
Genetic Location Database (LDB). Locations for expressed sequences and polymorphic markers
http://cedar.genetics.soton.ac.uk/public_html/ldb.html
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ePath
Sequence-based integrated maps of the human genome
http://cedar.genetics.soton.ac.uk/public_html/LDB2000.html/ LDB2000.
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