| References |
|
|
Ahlgren NA and
Rocap G
(2006)
Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies.
Applied and Environmental Microbiology
72:
7193–7204.
|
|
|
Ahlgren NA,
Rocap G and
Chisholm SW
(2005)
Measurement of Prochlorococcus ecotypes using real-time polymerase chain reaction reveals different abundances of genotypes with similar light physiologies.
Environmental Microbiology
8:
441–454.
|
|
|
Bertilsson S,
Bergland O,
Karl DM and
Chisholm SW
(2003)
Elemental composition of marine Prochlorococcus and Synechococcus: implications for the ecological stoichiometry of the sea.
Limnology Oceanography
48:
1721–1731.
|
|
|
Bertilsson S,
Berglund O,
Pullin MJ and
Chisholm SW
(2005)
Release of dissolved organic matter by Prochlorococcus.
Vie Milieu
55:
225–231.
|
|
|
Bibby TS,
Mary I,
Nield J,
Partensky F and
Barber J
(2003)
Low-light-adapted Prochlorococcus species possess specific antennae for each photosystem.
Nature
424:
1051–1054.
|
|
|
Bouman HA,
Ulloa O,
Scanlan DJ et al.
(2006)
Oceanographic basis of the global surface distribution of Prochlorococcus ecotypes.
Science
312:
918–921.
|
|
|
Campbell L,
Liu HB,
Nolla HA and
Vaulot D
(1997)
Annual variability of phytoplankton and bacteria in the subtropical north pacific ocean at station ALOHA during the 1991–1994 ENSO event.
Deep-Sea Research
44:
167–192.
|
|
|
Casey JR,
Lomas MW,
Mandecki J and
Walker DE
(2007)
Prochlorococcus contributes to new production in the Sargasso Sea deep chlorophyll maximum.
Geophysical Research Letters
34:
1–5.
|
|
|
Chisholm SW,
Frankel SL,
Goericke R et al.
(1992)
Prochlorococcus marinus nov. gen. nov. sp.: an oxyphototrophic marine prokaryote containing divinyl chlorophyll a and b.
Archives for Microbiology
157:
297–300.
|
|
|
Chisholm SW,
Olson RJ,
Zettler ER et al.
(1988)
A novel free-living prochlorophyte abundant in the oceanic euphotic zone.
Nature
334:
340–343.
|
|
|
Christaki U,
Jacquet S,
Dolan JR,
Vaulot D and
Rassoulzadegan F
(1999)
Growth and grazing on Prochlorococcus and Synechococcus by two marine ciliates.
Limnology Oceanography
44:
52–61.
|
|
|
Coleman ML and
Chisholm SW
(2007)
Code and context: Prochlorococcus as a model for cross-scale biology.
Trends in Microbiology
15:
398–407.
|
|
|
Coleman ML,
Sullivan MB,
Martiny AC et al.
(2006)
Genomic islands and the ecology and evolution of Prochlorococcus.
Science
311:
1768–1770.
|
|
|
Dufresne A,
Ostrowski M,
Scanlan DJ et al.
(2008)
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria.
Genome Biology
9:
R90.
|
|
|
Dufresne A,
Salanoubat M,
Partensky F et al.
(2003)
Genome sequence of the Cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.
Proceedings of the National Academy of Sciences of the USA
100:
10020–10025.
|
|
|
Durand MDR,
Olson RJ and
Chisholm SW
(2001)
Phytoplankton population dynamics at the Bermuda Atlantic time series station in the Sargasso Sea.
Deep-Sea Research II
48:
1983–2003.
|
|
|
Field CB,
Behrenfeld MJ,
Randerson JT and
Falkowski P
(1998)
Primary production of the biosphere: integrating terrestrial and oceanic components.
Science
281:
237–240.
|
|
|
Gieskes WW and
Kraay GW
(1983)
Unknown chlorophyll a derivatives in the North Sea and the tropical Atlantic revealed by HPLC analysis.
Limnology Oceanography
28:
757–766.
|
|
|
Goericke R and
Repeta DJ
(1992)
The pigments of Prochlorococcus marinus: the presence of divinyl chlorophyll a and b in a marine prochlorophyte.
Limnology Oceanography
37:
425–433.
|
|
|
Hess WR,
Rocap G,
Ting CS et al.
(2001)
The photosynthetic apparatus of Prochlorococcus: insights through comparative genomics.
Photosynthesis Research
70:
53–71.
|
|
|
Johnson PW and
Sieburth JM
(1979)
Chroococcoid cyanobacteria in the sea: a ubiquitous and diverse phototrophic biomass.
Limnology Oceanography
24:
928–935.
|
|
|
Johnson ZI,
Zinser ER,
Coe A et al.
(2006)
Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients.
Science
311:
1737–1740.
|
|
|
Kettler GC,
Martiny AC,
Huang K et al.
(2007)
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus.
PLoS Genetics
3:
2515–2528.
|
|
|
Lavin P,
Gonzalez B,
Santlbanez JF,
Scanlan DJ and
Ulloa O
(2010)
Novel lineages of Prochlorococcus thrive within the oxygen minimum zone of the eastern tropical South Pacific.
Environmental Microbiology Reports. doi: 10.1111/j.1758-2229.2010.00167.x.
|
|
|
Malmstrom RR,
Coe A,
Kettler GC et al.
(2010)
Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans.
ISME Journal. doi: 10.1038/ismej.2010.60.
|
|
|
book
Marie D,
Brussaard C,
Partensky F and
Vaulot D
(1999)
"Flow cytometric analysis of phytoplankton, bacteria and viruses".
In: Paul Robinson MEJ (ed.)
Current Protocols in Cytometry,
pp. 1–15.
New York, NY: Wiley.
|
|
|
Martiny AC,
Coleman ML and
Chisholm SW
(2006)
Phosphate acquisition genes in Prochlorococcus ecotypes: evidence for genome-wide adaptation.
Proceedings of the National Academy of Sciences of the USA
103:
12552–12557.
|
|
|
Martiny AC,
Kathuria S and
Berube PM
(2009)
Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes.
Proceedings of the National Academy of Sciences of the USA
106:
10787–10792.
|
|
|
Martiny AC,
Tai AP,
Veneziano D,
Primeau F and
Chisholm SW
(2008)
Taxonomic resolution, ecotypes and the biogeography of Prochlorococcus.
Environmental Microbiology
11:
823–832.
|
|
|
Moore LR and
Chisholm SW
(1999)
Photophysiology of the marine cyanobacterium Prochlorococcus: ecotypic differences among cultured isolates.
Limnology Oceanography
44:
428–438.
|
|
|
Moore LR,
Goericke R and
Chisholm SW
(1995)
Comparative physiology of Synechococcus and Prochlorococcus: influence of light and temperature on growth, pigments, fluorescence and absorptive properties.
Marine Ecology Progress Series
39:
257–269.
|
|
|
Moore LR,
Ostrowski M,
Scanlan DJ,
Feren K and
Sweetsir T
(2005)
Ecotypic variation in phosphorus acquisition mechanisms within marine picocyanobacteria.
Aquatic Microbial Ecology
39:
257–269.
|
|
|
Moore LR,
Post AF,
Rocap G and
Chisholm SW
(2002)
Utilization of different nitrogen sources by the marine cyanobacteria Prochlorococcus and Synechococcus.
Limnology Oceanography
47:
989–996.
|
|
|
Partensky F and
Garczarek L
(2010)
Prochlorococcus: advantages and limits of minimalism.
Annual Review Marine Science
2:
305–331.
|
|
|
Partensky F,
Hess W and
Vaulot D
(1999)
Prochlorococcus, a marine photosynthetic prokaryote of global significance.
Microbiology and Molecular Biology Reviews
63:
106–127.
|
|
|
Partensky F,
Hoepffner N,
Li WGW,
Ulloa O and
Vaulot D
(1993)
Photoacclimation of Prochlorococcus sp. (Prochlorophyta) strains isolated from the North Atlantic and the Mediterranean Sea.
Plant Physiology
101:
285–296.
|
|
|
Rocap G,
Distel D,
Waterbury JB and
Chisholm SW
(2002)
Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences.
Applied and Environmental Microbiology
68:
1180–1191.
|
|
|
Rocap G,
Larimer FW,
Lamerdin J et al.
(2003)
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.
Nature
424:
1042–1047.
|
|
|
Savage DC
(1977)
Microbial ecology of the gastrointestinal tract.
Annual Review of Microbiology
31:
107–133.
|
|
|
Scanlan DJ,
Ostrowski M,
Mazard S et al.
(2009)
Ecological genomics of marine picocyanobacteria.
Microbiology and Molecular Biology Reviews
73:
249–299.
|
|
|
Scanlan DJ and
West NJ
(2002)
Molecular ecology of the marine cyanobacterial genera Prochlorococcus and Synechococcus.
FEMS Microbiology Ecology
40:
1–12.
|
|
|
Seymour JR,
Ahmed T,
Durham WM and
Stocker R
(2010)
Chemotactic response of marine bacteria to the extracellular products of Synechococcus and Prochlorococcus.
Aquatic Microbial Ecology
59:
161–168.
|
|
|
Steglich C,
Futschik M,
Rector T,
Steen R and
Chisholm SW
(2006)
Genome-wide analysis of light sensing in Prochlorococcus.
Journal of Bacteriology
188:
7796–7806.
|
|
|
Steglich C,
Mullineaux CW,
Teuchner K,
Hess WR and
Lokstein H
(2003)
Photophysical properties of Prochlorococcus marinus SS120 divinyl chlorophylls and phycoerythrin in vitro and in vivo.
FEBS Letters
553:
79–84.
|
|
|
Sutherland KR,
Madin LP and
Stocker R
(2010)
Filtration of submicrometer particles by pelagic tunicates.
Proceedings of the National Academy of Sciences of the USA
107:
15129–15134.
|
|
|
Urbach E,
Scanlan DJ,
Distel DD,
Waterbury JB and
Chisholm SW
(1998)
Rapid diversification of marine phytoplankton with dissimilar light harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria).
Journal of Molecular Evolution
46:
188–201.
|
|
|
Van Mooy BAS,
Rocap G,
Fredricks HF,
Evans CT and
Devol AH
(2006)
Sulfolipids dramatically decrease phosphorus demand by picocyanobacteria in oligotrophic marine environments.
Proceedings of the National Academy of Sciences of the USA
103:
8607–8612.
|
|
|
West NJ,
Schonhuber WA,
Fuller NJ et al.
(2001)
Closely related Prochlorococcus genotypes show remarkably different depth distributions in two oceanic regions as revealed by in situ hybridization using 16S rRNA-targeted oligonucleotides.
Microbiology
147:
1731–1744.
|
|
|
Zinser ER,
Coe A,
Johnson ZI et al.
(2006)
Prochlorococcus ecotype abundances in the North Atlantic Ocean as revealed by an improved quantitative PCR method.
Applied and Environmental Microbiology
72:
723–732.
|
|
|
Zinser ER,
Lindell D,
Johnson ZI et al.
(2009)
Choreography of the transcriptome, photophysiology, and cell cylcle of a minimal photoautotroph, Prochlorococcus.
PLoS ONE
4:
1–18.
|
|
|
Zwirglmaier K,
Jardillier L,
Ostrowski M et al.
(2008)
Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes.
Environmental Microbiology
10:
147–161.
|
| Further Reading |
|
|
book
Bang M and
Chisholm P
(2009)
Living Sunlight: How Plants Bring Life to the Earth.
New York: Blue Sky Press/Scholastic. 43pp. (a children's book on Photosynthesis).
|
|
|
Chen M and
Bibby TS
(2005)
Photosynthetic apparatus of antenna-reaction centres supercomplexes in oxyphotobacteria: Insight through significance of Pcb/IsiA proteins.
Photosynthesis Research
86:
165–173.
|
|
|
book
Herrero A and
Flores E (eds)
(2008)
The Cyanobacteria: Molecular Biology, Genomics and Evolution, 484pp.
Norwich, UK: Caister Academic Press.
|
|
|
book
Kirchman DL and
Mitchell R (eds)
(2008)
Microbial Ecology of the Oceans, 2nd ed., 620pp.
New York: Wiley.
|
|
|
Lindell D and
Post AF
(1995)
Ultraphytoplankton succession is triggered by deep winter mixing in the Gulf of Aqaba (Eilat), Red Sea.
Limnology & Oceanography
40:
1130–1141.
|
|
|
Morel A,
Ahn Y-H,
Partensky F,
Vaulot D and
Claustre H
(1993)
Prochlorococcus and Synechococcus: a comparative study of their optical properties in relation to their size and pigmentation.
Journal of Marine Research
51:
617–649.
|
|
| ePath
Nadis S
(2003) The Cells that Rule the Seas. Scientific American, 52f. December. http://sciam.com/article.cfm?chanID=sa022&articleID=0005BE47-0078-1FA8-807883414B7F0000.
|
|
| ePath
Palca J
(2008)
The Most Important Microbe You've Never Heard Of, National Public Radio Morning Edition. Available at http://www.npr.org/templates/story/story.php?storyId=91448837.Accessed on June 13, 2008.
|
|
|
Paul JH and
Sullivan MB
(2005)
Marine phage genomics: what have we learned?
Current Opinion in Biotechnology
16:
299–307.
|
|
|
Van Mooy BAS,
Fredricks HF,
Pedler BE et al.
(2009)
Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity.
Nature
458:
69–72.
|
